MMinte

by Helena Mendes Soares

MMinte (pronounced /‘minti/) is an integrated pipeline that allows users to explore the pairwise interactions (positive or negative) that occur in a microbial network. From an association network and 16S rDNA sequence data, MMinte identifies corresponding genomes, reconstructs metabolic models, estimates growth under specific metabolic conditions, analyzes pairwise interactions, assigns interaction types to network links, and generates the corresponding network of interactions. Our application is composed of seven widgets that run sequentially, and each widget may also be run as independent modules.

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